Molecular basis of cross-interactions between Aβ and Tau protofibrils probed by molecular simulations
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Molecular basis of cross-interactions between Aβ and Tau protofibrils probed by molecular simulations
Chinese Journal of Chemical EngineeringVol. 55, Issue 3, Pages: 173-180(2023)
Affiliations:
1. State Key Laboratory of Food Nutrition and Safety, Key Laboratory of Industrial Fermentation Microbiology of Ministry of Education, Tianjin Key Laboratory of Industrial Microbiology, College of Biotechnology, Tianjin University of Science & Technology,Tianjin,China,300457
2. College of Marine and Environmental Science, Tianjin University of Science & Technology,Tianjin,China,300457
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Published:2023
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Fufeng Liu, Luying Jiang, Jingcheng Sang, Fuping Lu, Li Li. Molecular basis of cross-interactions between Aβ and Tau protofibrils probed by molecular simulations[J]. Chinese Journal of Chemical Engineering, 2023, 55(3): 173-180.
DOI:
Fufeng Liu, Luying Jiang, Jingcheng Sang, Fuping Lu, Li Li. Molecular basis of cross-interactions between Aβ and Tau protofibrils probed by molecular simulations[J]. Chinese Journal of Chemical Engineering, 2023, 55(3): 173-180.DOI:
Molecular basis of cross-interactions between Aβ and Tau protofibrils probed by molecular simulations
two common pathogenic proteins associated with Alzheimer’s disease (AD)
cross-interact
and thus co-assemble into hybrid aggregates. However
molecular mechanism of the cross-interactions remains unclear. To explore the issue
docking and molecular dynamics (MD) simulations were coupled to study the cross-interactions between Aβ pentamer and Tau pentamer. Four stable hybrid decamer conformations including double layer
single layer
block
and part-in were obtained by protein-protein docking software HADDOCK 2.2. Then
MD simulations were used to explore the molecular mechanism of cross-interactions between Aβ pentamer and Tau pentamer. The results of MD simulations showed that the part-in structure was the most stable among all the above four representative ones. The binding energy between Aβ and Tau was about -759.77 kJ·mol
-1
in the part-in structure. Moreover
the part-in conformation would undergo conformational transition
which would improve its hydrophobicity and make the structure more compact. This work offers a structural understanding of cross-interactions between Aβ and Tau linked to AD.
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